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  "Title": "A Shiny Application for Automatic Measurements of Tree-Ring\nWidths on Digital Images",
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  "Authors@R": "c(person(\"Jingning\", \"Shi\", role = c(\"aut\", \"cre\"), email = \"snow940220@bjfu.edu.cn\"), person(\"Wei\", \"Xiang\", role = \"aut\"))",
  "Author": "Jingning Shi [aut, cre], Wei Xiang [aut]",
  "Maintainer": "Jingning Shi <snow940220@bjfu.edu.cn>",
  "Description": "Use morphological image processing and edge detection\nalgorithms to automatically measure tree ring widths on digital\nimages. Users can also manually mark tree rings on species with\ncomplex anatomical structures. The arcs of inner-rings and\nangles of successive inclined ring boundaries are used to\ncorrect ring-width series. The package provides a Shiny-based\napplication, allowing R beginners to easily analyze tree ring\nimages and export ring-width series in standard file formats.",
  "License": "GPL-3",
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  "Encoding": "UTF-8",
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  "Repository": "https://ropensci.r-universe.dev",
  "Date/Publication": "2024-07-17 15:02:06 UTC",
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    "forestry",
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