Package: babette
Title: Control 'BEAST2'
Version: 2.3.5
Authors@R: c(
    person("Richèl J.C.", "Bilderbeek", email = "rjcbilderbeek@gmail.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0003-1107-7049")),
    person("Joëlle", "Barido-Sottani", role = "rev", comment = "Joëlle reviewed the package for rOpenSci, see https://github.com/richelbilderbeek/onboarding/issues/209"),
    person("David", "Winter", role = "rev", comment = "David reviewed the package for rOpenSci, see https://github.com/richelbilderbeek/onboarding/issues/209"),
    person("Jason", "Griffiths", role = "ctb", comment = c(ORCID = "0000-0002-1667-8233")),
    person("Olivier", "Roy", role = "ctb"),
    person("Tanmay", "Dimri", role = "ctb"),
    person("Giovanni", "Laudanno", email = "glaudanno@gmail.com", role = "ctb"))
Description: 'BEAST2' (<https://www.beast2.org>) is a widely used
        Bayesian phylogenetic tool, that uses DNA/RNA/protein data and
        many model priors to create a posterior of jointly estimated
        phylogenies and parameters. 'BEAST2' is commonly accompanied by
        'BEAUti 2', 'Tracer' and 'DensiTree'. 'babette' provides for an
        alternative workflow of using all these tools separately. This
        allows doing complex Bayesian phylogenetics easily and
        reproducibly from 'R'.
License: GPL-3
RoxygenNote: 7.3.3.9000
VignetteBuilder: knitr
URL: https://docs.ropensci.org/babette/ (website),
        https://github.com/ropensci/babette
BugReports: https://github.com/ropensci/babette/issues
Depends: beautier (>= 2.6.13), beastier (>= 2.5), mauricer (>= 2.5.2),
        R (>= 3.5.0), tracerer
Imports: phangorn, rlang (>= 1.1.0), stringr, xml2
Suggests: ape, ggplot2, knitr (>= 1.50), lintr, nLTT, rappdirs,
        rmarkdown, spelling, testthat (>= 2.1.0), readr
Language: en-US
Encoding: UTF-8
SystemRequirements: BEAST2 (https://www.beast2.org/)
Config/pak/sysreqs: libglpk-dev make default-jdk libicu-dev libxml2-dev
        libx11-dev zlib1g-dev
Repository: https://ropensci.r-universe.dev
Date/Publication: 2026-03-13 06:22:44 UTC
RemoteUrl: https://github.com/ropensci/babette
RemoteRef: main
RemoteSha: ea644a8a68c7e314130537caa2603e0acbe37207
NeedsCompilation: no
Packaged: 2026-07-01 08:18:57 UTC; root
Author: Richèl J.C. Bilderbeek [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-1107-7049>),
  Joëlle Barido-Sottani [rev] (Joëlle reviewed the package for rOpenSci,
    see https://github.com/richelbilderbeek/onboarding/issues/209),
  David Winter [rev] (David reviewed the package for rOpenSci, see
    https://github.com/richelbilderbeek/onboarding/issues/209),
  Jason Griffiths [ctb] (ORCID: <https://orcid.org/0000-0002-1667-8233>),
  Olivier Roy [ctb],
  Tanmay Dimri [ctb],
  Giovanni Laudanno [ctb]
Maintainer: Richèl J.C. Bilderbeek <rjcbilderbeek@gmail.com>