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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "cRegulome" in publications use:'
type: software
license: GPL-3.0-only
title: 'cRegulome: Obtain and Visualize Regulome-Gene Expression Correlations in Cancer'
version: 0.3.2
doi: 10.7717/peerj.6509
identifiers:
- type: doi
  value: 10.32614/CRAN.package.cRegulome
abstract: Builds a 'SQLite' database file of pre-calculated transcription factor/microRNA-gene
  correlations (co-expression) in cancer from the Cistrome Cancer Liu et al. (2011)
  <https://doi.org/10.1186/gb-2011-12-8-r83> and 'miRCancerdb' databases (in press).
  Provides custom classes and functions to query, tidy and plot the correlation data.
authors:
- family-names: Ahmed
  given-names: Mahmoud
  email: mahmoud.s.fahmy@students.kasralainy.edu.eg
  orcid: https://orcid.org/0000-0002-4377-6541
preferred-citation:
  type: article
  title: 'cRegulome: an R package for accessing microRNA and transcription factor-gene
    expression correlations in cancer'
  authors:
  - family-names: Ahmed
    given-names: Mahmoud
    email: mahmoud.s.fahmy@students.kasralainy.edu.eg
    orcid: https://orcid.org/0000-0002-4377-6541
  - family-names: Kim
    given-names: Deok Ryong
  year: '2019'
  journal: PeerJ
  doi: 10.7717/peerj.6509
  volume: '7'
  start: e6509
repository: https://ropensci.r-universe.dev
repository-code: https://github.com/ropensci/cRegulome
commit: b3d7fba6f3a8e688b0b7a90aae20ac1677fdb7f0
url: https://docs.ropensci.org/cRegulome
contact:
- family-names: Ahmed
  given-names: Mahmoud
  email: mahmoud.s.fahmy@students.kasralainy.edu.eg
  orcid: https://orcid.org/0000-0002-4377-6541