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{"Package":"epubr","Version":"0.6.4","Title":"Read EPUB File Metadata and Text","Description":"Provides functions supporting the reading and parsing of\ninternal e-book content from EPUB files. The 'epubr' package\nprovides functions supporting the reading and parsing of\ninternal e-book content from EPUB files. E-book metadata and\ntext content are parsed separately and joined together in a\ntidy, nested tibble data frame. E-book formatting is not\ncompletely standardized across all literature. It can be\nchallenging to curate parsed e-book content across an arbitrary\ncollection of e-books perfectly and in completely general form,\nto yield a singular, consistently formatted output. Many EPUB\nfiles do not even contain all the same pieces of information in\ntheir respective metadata. EPUB file parsing functionality in\nthis package is intended for relatively general application to\narbitrary EPUB e-books. However, poorly formatted e-books or\ne-books with highly uncommon formatting may not work with this\npackage. There may even be cases where an EPUB file has DRM or\nsome other property that makes it impossible to read with\n'epubr'. Text is read 'as is' for the most part. The only\nnominal changes are minor substitutions, for example curly\nquotes changed to straight quotes. Substantive changes are\nexpected to be performed subsequently by the user as part of\ntheir text analysis. Additional text cleaning can be performed\nat the user's discretion, such as with functions from packages\nlike 'tm' or 'qdap'.","Authors@R":"person(\"Matthew\", \"Leonawicz\", email = \"mfleonawicz@gmail.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0001-9452-2771\"))","License":"MIT + file LICENSE","Encoding":"UTF-8","ByteCompile":"true","URL":"https://docs.ropensci.org/epubr/ (website)\nhttps://github.com/ropensci/epubr","BugReports":"https://github.com/ropensci/epubr/issues","VignetteBuilder":"knitr","RoxygenNote":"7.2.3","Repository":"https://ropensci.r-universe.dev","RemoteUrl":"https://github.com/ropensci/epubr","RemoteRef":"master","RemoteSha":"22f3abecf1c6790573fdc95c6ce5558794161245","NeedsCompilation":"no","Packaged":{"Date":"2024-07-19 15:25:51 UTC","User":"root"},"Author":"Matthew Leonawicz [aut, cre] ()","Maintainer":"Matthew Leonawicz ","MD5sum":"c4b0d43fac3e3869dfbd00004a427894","_user":"ropensci","_file":"epubr_0.6.4.tar.gz","_fileid":"c4b0d43fac3e3869dfbd00004a427894","_filesize":615147,"_created":"2024-07-19T15:25:51.000Z","_published":"2024-07-19T15:30:44.163Z","_upstream":"https://github.com/ropensci/epubr","_commit":{"id":"22f3abecf1c6790573fdc95c6ce5558794161245","author":"Matt Leonawicz ","committer":"GitHub ","message":"Merge pull request #4 from ropensci/maelle-patch-1\n\ndocs: remove useless pkgdown navbar config","time":1721401220},"_maintainer":{"name":"Matthew Leonawicz","email":"mfleonawicz@gmail.com","login":"leonawicz","orcid":"0000-0001-9452-2771"},"_distro":"noble","_host":"GitHub-Actions","_status":"success","_pkgdocs":"success","_winbinary":"success","_macbinary":"success","_wasmbinary":"success","_linuxdevel":"success","_windevel":"success","_buildurl":"https://github.com/r-universe/ropensci/actions/runs/10010444244","_registered":true,"_dependencies":[{"package":"xml2","role":"Imports"},{"package":"xslt","role":"Imports"},{"package":"magrittr","role":"Imports"},{"package":"tibble","role":"Imports"},{"package":"dplyr","role":"Imports"},{"package":"tidyr","role":"Imports"},{"package":"testthat","role":"Suggests"},{"package":"knitr","role":"Suggests"},{"package":"rmarkdown","role":"Suggests"},{"package":"readr","role":"Suggests"}],"_owner":"ropensci","_selfowned":true,"_usedby":0,"_updates":[{"week":"2023-36","n":3},{"week":"2024-29","n":1}],"_tags":[{"name":"v0.6.4","date":"2023-09-10"}],"_topics":["epub","epub-files","epub-format","peer-reviewed"],"_organization":true,"_stars":24,"_contributions":{"leonawicz":7,"bisaloo":1,"maelle":1},"_usertype":"organization","_crandownloads":328,"_devurl":"https://github.com/ropensci/epubr","_assets":["extra/citation.cff","extra/citation.html","extra/citation.json","extra/citation.txt","extra/contents.json","extra/epubr.html","extra/NEWS.html","extra/NEWS.txt","extra/readme.html","extra/readme.md","manual.pdf"],"_homeurl":"https://github.com/ropensci/epubr","_realowner":"ropensci","_cranurl":true,"_releases":[{"version":"0.4.0","date":"2018-05-30"},{"version":"0.4.1","date":"2018-08-01"},{"version":"0.5.0","date":"2018-10-22"},{"version":"0.6.0","date":"2019-01-11"},{"version":"0.6.1","date":"2019-11-28"},{"version":"0.6.2","date":"2021-02-21"},{"version":"0.6.3","date":"2021-06-18"},{"version":"0.6.4","date":"2023-09-10"}],"_exports":["count_words","epub","epub_cat","epub_head","epub_meta","epub_recombine","epub_reorder","epub_sift","epub_unzip"],"_help":[{"page":"count_words","title":"Word count","topics":["count_words"]},{"page":"epub","title":"Extract and read EPUB e-books","topics":["epub","epub_meta","epub_unzip"]},{"page":"epub_cat","title":"Pretty printing of EPUB text","topics":["epub_cat"]},{"page":"epub_head","title":"Preview the first n characters","topics":["epub_head"]},{"page":"epub_recombine","title":"Recombine text sections","topics":["epub_recombine"]},{"page":"epub_reorder","title":"Reorder sections","topics":["epub_reorder"]},{"page":"epub_sift","title":"Sift EPUB sections","topics":["epub_sift"]},{"page":"epubr","title":"epubr: Read EPUB file metadata and text.","topics":["epubr-package","epubr"]}],"_pkglogo":"https://github.com/ropensci/epubr/raw/master/man/figures/logo.png","_readme":"https://github.com/ropensci/epubr/raw/master/README.md","_rundeps":["cli","cpp11","dplyr","fansi","generics","glue","lifecycle","magrittr","pillar","pkgconfig","purrr","R6","Rcpp","rlang","stringi","stringr","tibble","tidyr","tidyselect","utf8","vctrs","withr","xml2","xslt"],"_vignettes":[{"source":"epubr.Rmd","filename":"epubr.html","title":"Introduction to epubr","engine":"knitr::rmarkdown","headings":["Read EPUB files","EPUB metadata","Additional arguments","Select fields","Drop sections","Guess chapters","Restructure parsed content","Split and recombine into new sections","Reorder sections based on pattern in text","Unzip EPUB file","Other functions","Word count","Inspection"],"created":"2018-05-26 23:31:12","modified":"2021-06-18 19:57:22","commits":8}],"_score":2.5356485015246157,"_indexed":true,"_universes":["ropensci","leonawicz"],"_nocasepkg":"epubr"}
{"Package":"tiler","Title":"Create Geographic and Non-Geographic Map Tiles","Version":"0.3.1","Authors@R":"c(\nperson(\"Matthew\", \"Leonawicz\", email = \"mfleonawicz@gmail.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0001-9452-2771\")),\nperson(\"Alex M\", \"Chubaty\", email = \"achubaty@for-cast.ca\", role = \"ctb\", comment = c(ORCID = \"0000-0001-7146-8135\"))\n)","Description":"Creates geographic map tiles from geospatial map files or\nnon-geographic map tiles from simple image files. This package\nprovides a tile generator function for creating map tile sets\nfor use with packages such as 'leaflet'. In addition to\ngenerating map tiles based on a common raster layer source, it\nalso handles the non-geographic edge case, producing map tiles\nfrom arbitrary images. These map tiles, which have a\nnon-geographic, simple coordinate reference system (CRS), can\nalso be used with 'leaflet' when applying the simple CRS\noption. Map tiles can be created from an input file with any of\nthe following extensions: tif, grd and nc for spatial maps and\npng, jpg and bmp for basic images. This package requires\n'Python' and the 'gdal' library for 'Python'. 'Windows' users\nare recommended to install 'OSGeo4W'\n() as an easy way to obtain\nthe required 'gdal' support for 'Python'.","License":"MIT + file LICENSE","URL":"https://docs.ropensci.org/tiler/,\nhttps://github.com/ropensci/tiler","BugReports":"https://github.com/ropensci/tiler/issues","VignetteBuilder":"knitr","ByteCompile":"true","Encoding":"UTF-8","Roxygen":"list(markdown = TRUE)","RoxygenNote":"7.2.3","SystemRequirements":"Python (>= 2.7), python-gdal library (For Windows,\ngdal installed via OSGeo4W \nrecommended) clipboard","Repository":"https://ropensci.r-universe.dev","RemoteUrl":"https://github.com/ropensci/tiler","RemoteRef":"master","RemoteSha":"f49b366e2b01e8d95eb206de1ce7cfc9ad5a59dc","NeedsCompilation":"no","Packaged":{"Date":"2024-07-19 15:25:57 UTC","User":"root"},"Author":"Matthew Leonawicz [aut, cre] (),\nAlex M Chubaty [ctb] ()","Maintainer":"Matthew Leonawicz ","MD5sum":"d7a318b1f8b2ea72231b10bb323c4d85","_user":"ropensci","_file":"tiler_0.3.1.tar.gz","_fileid":"d7a318b1f8b2ea72231b10bb323c4d85","_filesize":960882,"_created":"2024-07-19T15:25:57.000Z","_published":"2024-07-19T15:30:40.148Z","_upstream":"https://github.com/ropensci/tiler","_commit":{"id":"f49b366e2b01e8d95eb206de1ce7cfc9ad5a59dc","author":"Matt Leonawicz ","committer":"GitHub ","message":"Merge pull request #25 from ropensci/maelle-patch-1\n\ndocs: fix pkgdown navbar config","time":1721401136},"_maintainer":{"name":"Matthew Leonawicz","email":"mfleonawicz@gmail.com","login":"leonawicz","orcid":"0000-0001-9452-2771"},"_distro":"noble","_host":"GitHub-Actions","_status":"success","_pkgdocs":"success","_winbinary":"success","_macbinary":"success","_wasmbinary":"success","_linuxdevel":"success","_windevel":"success","_buildurl":"https://github.com/r-universe/ropensci/actions/runs/10010445785","_registered":true,"_dependencies":[{"package":"png","role":"Imports"},{"package":"raster","role":"Imports"},{"package":"sp","role":"Imports"},{"package":"bmp","role":"Suggests"},{"package":"jpeg","role":"Suggests"},{"package":"knitr","role":"Suggests"},{"package":"leaflet","role":"Suggests"},{"package":"parallel","role":"Suggests"},{"package":"rmarkdown","role":"Suggests"},{"package":"sf","role":"Suggests"},{"package":"testthat","role":"Suggests"},{"package":"webshot","role":"Suggests"}],"_owner":"ropensci","_selfowned":true,"_usedby":2,"_updates":[{"week":"2023-30","n":9},{"week":"2023-32","n":1},{"week":"2023-36","n":1},{"week":"2024-29","n":1}],"_tags":[{"name":"v0.3.0","date":"2023-08-08"},{"name":"v0.3.1","date":"2023-09-10"}],"_organization":true,"_stars":63,"_contributions":{"achubaty":20,"leonawicz":18,"jebyrnes":1,"jeroen":1,"maelle":1},"_usertype":"organization","_crandownloads":312,"_devurl":"https://github.com/ropensci/tiler","_assets":["extra/citation.cff","extra/citation.html","extra/citation.json","extra/citation.txt","extra/contents.json","extra/NEWS.html","extra/NEWS.txt","extra/readme.html","extra/readme.md","extra/tiler.html","manual.pdf"],"_homeurl":"https://github.com/ropensci/tiler","_realowner":"ropensci","_cranurl":true,"_releases":[{"version":"0.1.6","date":"2018-06-06"},{"version":"0.2.0","date":"2018-06-09"},{"version":"0.2.1","date":"2018-11-18"},{"version":"0.2.3","date":"2019-11-22"},{"version":"0.2.4","date":"2019-11-26"},{"version":"0.2.5","date":"2021-02-21"},{"version":"0.3.0","date":"2023-08-09"},{"version":"0.3.1","date":"2023-09-10"}],"_exports":["tile","tile_viewer","tiler_options","view_tiles"],"_help":[{"page":"tile","title":"Create map tiles","topics":["tile"]},{"page":"tile_viewer","title":"Create an HTML tile preview","topics":["tile_viewer"]},{"page":"tiler","title":"tiler: Create map tiles from R","topics":["tiler-package","tiler"]},{"page":"tiler_options","title":"Options","topics":["tiler_options"]},{"page":"view_tiles","title":"View map tiles with Leaflet","topics":["view_tiles"]}],"_pkglogo":"https://github.com/ropensci/tiler/raw/master/man/figures/logo.png","_readme":"https://github.com/ropensci/tiler/raw/master/README.md","_rundeps":["lattice","png","raster","Rcpp","sp","terra"],"_vignettes":[{"source":"tiler-intro.Rmd","filename":"tiler-intro.html","title":"Introduction to tiler","engine":"knitr::rmarkdown","headings":["Setup (Windows users)","Geographic map tiles","Context","Basic example","Projected maps","Missing CRS","Coloring tiles","RGB and RGBA rasters","Non-geographic map tiles","Additional arguments","Serving map tiles","Leaflet examples using remotely hosted tiles","Local preview","Details"],"created":"2019-11-25 00:02:20","modified":"2023-07-14 22:21:17","commits":2}],"_score":2.920707560331617,"_indexed":true,"_universes":["ropensci","leonawicz"],"_nocasepkg":"tiler"}
{"Package":"stats19","Title":"Work with Open Road Traffic Casualty Data from Great Britain","Version":"3.0.3","Authors@R":"c(\nperson(\"Robin\", \"Lovelace\", email = \"rob00x@gmail.com\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0001-5679-6536\")),\nperson(\"Malcolm\", \"Morgan\", email = \"m.morgan1@leeds.ac.uk\", role = c(\"aut\"),\ncomment = c(ORCID = \"0000-0002-9488-9183\")),\nperson(\"Layik\", \"Hama\", email = \"layik.hama@gmail.com\", role = c(\"aut\"),\ncomment = c(ORCID = \"0000-0003-1912-4890\")),\nperson(\"Mark\", \"Padgham\", role=c(\"aut\"),\ncomment = c(ORCID = \"0000-0003-2172-5265\")),\nperson(\"David\", \"Ranzolin\", role=c(\"rev\")),\nperson(\"Adam\", \"Sparks\", role = c(\"rev\", \"ctb\"),\ncomment = c(ORCID = \"0000-0002-0061-8359\")),\nperson(\"Ivo\", \"Wengraf\", role = c(\"ctb\")),\nperson(given = \"RAC Foundation\", role = c(\"fnd\"))\n)","Description":"Tools to help download, process and analyse the UK road\ncollision data collected using the 'STATS19' form. The datasets\nare provided as 'CSV' files with detailed road safety\ninformation about the circumstances of car crashes and other\nincidents on the roads resulting in casualties in Great Britain\nfrom 1979 to present. Tables are available on 'colissions' with\nthe circumstances (e.g. speed limit of road), information about\n'vehicles' involved (e.g. type of vehicle), and 'casualties'\n(e.g. age). The statistics relate only to events on public\nroads that were reported to the police, and subsequently\nrecorded, using the 'STATS19' collision reporting form. See the\nDepartment for Transport website\n\nfor more information on these datasets. The package is\ndescribed in a paper in the Journal of Open Source Software\n(Lovelace et al. 2019) . See Gilardi\net al. (2022) , Vidal-Tortosa et al.\n(2021) , and Tait et al. (2023)\n for examples of how the data\ncan be used for methodological and empirical road safety\nresearch.","License":"GPL-3","URL":"https://github.com/ropensci/stats19,\nhttps://docs.ropensci.org/stats19/","BugReports":"https://github.com/ropensci/stats19/issues","Encoding":"UTF-8","LazyData":"true","VignetteBuilder":"knitr","RoxygenNote":"7.2.3","Roxygen":"list(markdown = TRUE)","Language":"en-US","Repository":"https://ropensci.r-universe.dev","RemoteUrl":"https://github.com/ropensci/stats19","RemoteRef":"master","RemoteSha":"3242e367b7356a3131f1aebf585b93e4c26a5a2a","NeedsCompilation":"no","Packaged":{"Date":"2024-07-19 15:28:34 UTC","User":"root"},"Author":"Robin Lovelace [aut, cre] (),\nMalcolm Morgan [aut] (),\nLayik Hama [aut] (),\nMark Padgham [aut] (),\nDavid Ranzolin [rev],\nAdam Sparks [rev, ctb] (),\nIvo Wengraf [ctb],\nRAC Foundation [fnd]","Maintainer":"Robin Lovelace 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Not every execution starts from scratch,\nthere is native support for parallel and distributed computing,\nand completed projects have tangible evidence that they are\nreproducible. Extensive documentation, from beginner-friendly\ntutorials to practical examples and more, is available at the\nreference website and the\nonline manual .","License":"GPL-3","URL":"https://github.com/ropensci/drake,\nhttps://docs.ropensci.org/drake/,\nhttps://books.ropensci.org/drake/","BugReports":"https://github.com/ropensci/drake/issues","Encoding":"UTF-8","Language":"en-US","Roxygen":"list(markdown = TRUE)","RoxygenNote":"7.3.1","Repository":"https://ropensci.r-universe.dev","RemoteUrl":"https://github.com/ropensci/drake","RemoteRef":"main","RemoteSha":"4573b96dc2d9d57064bcdffdc3161119e792e245","NeedsCompilation":"no","Packaged":{"Date":"2024-07-18 19:24:30 UTC","User":"root"},"Author":"William Michael Landau [aut, cre]\n(),\nAlex Axthelm [ctb],\nJasper Clarkberg [ctb],\nKirill Müller [ctb],\nBen Bond-Lamberty [ctb] (),\nTristan Mahr [ctb] (),\nMiles McBain [ctb] (),\nNoam Ross [ctb] (),\nEllis Hughes [ctb],\nMatthew Mark Strasiotto [ctb],\nBen Marwick [rev],\nPeter Slaughter 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{"Package":"auk","Title":"eBird Data Extraction and Processing in R","Version":"0.7.1","Authors@R":"c(person(given = \"Matthew\",\nfamily = \"Strimas-Mackey\",\nrole = c(\"aut\", \"cre\"),\nemail = \"mes335@cornell.edu\",\ncomment = c(ORCID = \"0000-0001-8929-7776\")),\nperson(given = \"Eliot\",\nfamily = \"Miller\",\nrole = \"aut\"),\nperson(given = \"Wesley\",\nfamily = \"Hochachka\",\nrole = \"aut\"),\nperson(given = \"Cornell Lab of Ornithology\",\nrole = \"cph\"))","Description":"Extract and process bird sightings records from eBird\n(), an online tool for recording bird\nobservations. Public access to the full eBird database is via\nthe eBird Basic Dataset (EBD; see\n for access), a\ndownloadable text file. This package is an interface to AWK for\nextracting data from the EBD based on taxonomic, spatial, or\ntemporal filters, to produce a manageable file size that can be\nimported into R.","License":"GPL-3","URL":"https://github.com/CornellLabofOrnithology/auk,\nhttps://cornelllabofornithology.github.io/auk/","BugReports":"https://github.com/CornellLabofOrnithology/auk/issues","VignetteBuilder":"knitr","Encoding":"UTF-8","LazyData":"true","Roxygen":"list(markdown = TRUE)","RoxygenNote":"7.3.1","Repository":"https://ropensci.r-universe.dev","RemoteUrl":"https://github.com/CornellLabofOrnithology/auk","RemoteRef":"main","RemoteSha":"1b1a3932341ace23a252c53a2234f22dc3734470","NeedsCompilation":"no","Packaged":{"Date":"2024-07-18 16:33:32 UTC","User":"root"},"Author":"Matthew Strimas-Mackey [aut, cre]\n(),\nEliot Miller [aut],\nWesley Hochachka [aut],\nCornell Lab of Ornithology [cph]","Maintainer":"Matthew Strimas-Mackey ","MD5sum":"0a7ff13fbeb884a279472efa9f1acb77","_user":"ropensci","_file":"auk_0.7.1.tar.gz","_fileid":"0a7ff13fbeb884a279472efa9f1acb77","_filesize":1517355,"_created":"2024-07-18T16:33:32.000Z","_published":"2024-07-18T16:54:17.659Z","_buildurl":"https://github.com/r-universe/ropensci/actions/runs/9995158303","_upstream":"https://github.com/CornellLabofOrnithology/auk","_commit":{"id":"1b1a3932341ace23a252c53a2234f22dc3734470","author":"Matt Strimas-Mackey ","committer":"Matt Strimas-Mackey ","message":"rebuild pkgdown site\n","time":1721318332},"_maintainer":{"name":"Matthew Strimas-Mackey","email":"mes335@cornell.edu","login":"mstrimas","orcid":"0000-0001-8929-7776"},"_distro":"noble","_host":"GitHub-Actions","_status":"success","_pkgdocs":"success","_winbinary":"success","_macbinary":"success","_wasmbinary":"success","_linuxdevel":"success","_windevel":"success","_registered":true,"_dependencies":[{"package":"R","version":">= 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Codes","object":"bcr_codes","class":["tbl_df","tbl","data.frame"],"fields":["bcr_code","bcr_name"],"rows":66,"table":true,"tojson":true},{"name":"ebird_states","title":"eBird States","object":"ebird_states","class":["tbl_df","tbl","data.frame"],"fields":["country","country_code","state","state_code"],"rows":3145,"table":true,"tojson":true},{"name":"ebird_taxonomy","title":"eBird Taxonomy","object":"ebird_taxonomy","class":["data.frame"],"fields":["species_code","scientific_name","common_name","order","family","family_common","category","taxon_order","report_as","extinct"],"rows":17064,"table":true,"tojson":true},{"name":"valid_protocols","title":"Valid Protocols","object":"valid_protocols","class":["character"],"fields":[],"table":false,"tojson":true}],"_help":[{"page":"auk_bbox","title":"Filter the eBird data by spatial bounding box","topics":["auk_bbox"]},{"page":"auk_bcr","title":"Filter the eBird data by Bird Conservation Region","topics":["auk_bcr"]},{"page":"auk_breeding","title":"Filter to only include observations with breeding codes","topics":["auk_breeding"]},{"page":"auk_clean","title":"Clean an eBird data file (Deprecated)","topics":["auk_clean"]},{"page":"auk_complete","title":"Filter out incomplete checklists from the eBird data","topics":["auk_complete"]},{"page":"auk_country","title":"Filter the eBird data by country","topics":["auk_country"]},{"page":"auk_county","title":"Filter the eBird data by county","topics":["auk_county"]},{"page":"auk_date","title":"Filter the eBird data by date","topics":["auk_date"]},{"page":"auk_distance","title":"Filter eBird data by distance travelled","topics":["auk_distance"]},{"page":"auk_duration","title":"Filter the eBird data by duration","topics":["auk_duration"]},{"page":"auk_ebd","title":"Reference to eBird data file","topics":["auk_ebd"]},{"page":"auk_ebd_version","title":"Get the EBD version and associated taxonomy version","topics":["auk_ebd_version"]},{"page":"auk_exotic","title":"Filter the eBird data by exotic code","topics":["auk_exotic"]},{"page":"auk_extent","title":"Filter the eBird data by spatial extent","topics":["auk_extent"]},{"page":"auk_filter","title":"Filter the eBird file using AWK","topics":["auk_filter","auk_filter.auk_ebd","auk_filter.auk_sampling"]},{"page":"auk_get_awk_path","title":"OS specific path to AWK executable","topics":["auk_get_awk_path"]},{"page":"auk_get_ebd_path","title":"Return EBD data path","topics":["auk_get_ebd_path"]},{"page":"auk_last_edited","title":"Filter the eBird data by last edited date","topics":["auk_last_edited"]},{"page":"auk_observer","title":"Filter the eBird data by observer","topics":["auk_observer"]},{"page":"auk_project","title":"Filter the eBird data by project code","topics":["auk_project"]},{"page":"auk_protocol","title":"Filter the eBird data by protocol","topics":["auk_protocol"]},{"page":"auk_rollup","title":"Roll up eBird taxonomy to species","topics":["auk_rollup"]},{"page":"auk_sampling","title":"Reference to eBird sampling event file","topics":["auk_sampling"]},{"page":"auk_select","title":"Select a subset of columns","topics":["auk_select"]},{"page":"auk_set_awk_path","title":"Set a custom path to AWK executable","topics":["auk_set_awk_path"]},{"page":"auk_set_ebd_path","title":"Set the path to EBD text files","topics":["auk_set_ebd_path"]},{"page":"auk_species","title":"Filter the eBird data by species","topics":["auk_species"]},{"page":"auk_split","title":"Split an eBird data file by species","topics":["auk_split"]},{"page":"auk_state","title":"Filter the eBird data by state","topics":["auk_state"]},{"page":"auk_time","title":"Filter the eBird data by checklist start time","topics":["auk_time"]},{"page":"auk_unique","title":"Remove duplicate group checklists","topics":["auk_unique"]},{"page":"auk_version","title":"Versions of auk, the EBD, and the eBird taxonomy","topics":["auk_version"]},{"page":"auk_year","title":"Filter the eBird data to a set of years","topics":["auk_year"]},{"page":"auk_zerofill","title":"Read and zero-fill an eBird data file","topics":["auk_zerofill","auk_zerofill.auk_ebd","auk_zerofill.character","auk_zerofill.data.frame","collapse_zerofill"]},{"page":"bcr_codes","title":"BCR Codes","topics":["bcr_codes"]},{"page":"ebird_species","title":"Lookup species in eBird taxonomy","topics":["ebird_species"]},{"page":"ebird_states","title":"eBird States","topics":["ebird_states"]},{"page":"ebird_taxonomy","title":"eBird Taxonomy","topics":["ebird_taxonomy"]},{"page":"filter_repeat_visits","title":"Filter observations to repeat visits for hierarchical modeling","topics":["filter_repeat_visits"]},{"page":"format_unmarked_occu","title":"Format EBD data for occupancy modeling with 'unmarked'","topics":["format_unmarked_occu"]},{"page":"get_ebird_taxonomy","title":"Get eBird taxonomy via the eBird API","topics":["get_ebird_taxonomy"]},{"page":"process_barcharts","title":"Process eBird bar chart data","topics":["process_barcharts"]},{"page":"read_ebd","title":"Read an EBD file","topics":["read_ebd","read_ebd.auk_ebd","read_ebd.character","read_sampling","read_sampling.auk_ebd","read_sampling.auk_sampling","read_sampling.character"]},{"page":"valid_protocols","title":"Valid Protocols","topics":["valid_protocols"]}],"_pkglogo":"https://github.com/CornellLabofOrnithology/auk/raw/main/logo.png","_readme":"https://github.com/CornellLabofOrnithology/auk/raw/main/README.md","_rundeps":["askpass","assertthat","bit","bit64","cli","clipr","countrycode","cpp11","crayon","curl","dplyr","fansi","generics","glue","hms","httr","jsonlite","lifecycle","magrittr","mime","openssl","pillar","pkgconfig","prettyunits","progress","purrr","R6","readr","rlang","stringi","stringr","sys","tibble","tidyr","tidyselect","tzdb","utf8","vctrs","vroom","withr"],"_vignettes":[{"source":"development.Rmd","filename":"development.html","title":"auk development","engine":"knitr::rmarkdown","headings":["Updating the eBird taxonomy","Adding new filters","1. Update auk_ebd()","2. Create filter function","3. Update auk_filter()","4. Unit tests","5. Update vignette and README","6. Build, test, check, and push to GitHub","CRAN submission"],"created":"2017-10-12 02:08:31","modified":"2022-10-29 01:14:50","commits":8},{"source":"auk.Rmd","filename":"auk.html","title":"Introduction to auk","engine":"knitr::rmarkdown","headings":["Quick start","Background","The eBird Basic Dataset","auk vs. rebird","Data access","Example data","AWK","A note on versions","Presence data","The auk_ebd object","Defining filters","Executing filters","Reading","Saving the AWK command","Group checklists","Taxonomic rollup","Zero-filled, presence-absence data","Filtering","Reading and zero-filling","Acknowledgements","References"],"created":"2017-07-01 21:31:47","modified":"2023-11-11 06:58:14","commits":32}],"_score":3.194905447014576,"_indexed":true,"_universes":["ropensci","mstrimas","cornelllabofornithology"],"_nocasepkg":"auk"}
{"Package":"MODIStsp","Title":"Find, Download and Process MODIS Land Products Data","Type":"Package","Version":"2.1.0","Authors@R":"c(person(\"Lorenzo\", \"Busetto\", \nrole = c(\"aut\"),\ncomment = c(ORCID = '0000-0001-9634-6038')),\nperson(\"Luigi\", \"Ranghetti\",\nemail = \"rpackages.ranghetti@gmail.com\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = '0000-0001-6207-5188')),\nperson(\"Leah\", \"Wasser\",\nrole = \"rev\",\ncomment = \"Leah Wasser reviewed the package for rOpenSci, see\nhttps://github.com/ropensci/software-review/issues/184\"),\nperson(\"Jeff\", \"Hanson\",\nrole = \"rev\",\ncomment = \"Jeff Hanson reviewed the package for rOpenSci, see\nhttps://github.com/ropensci/software-review/issues/184\"),\nperson(\"Babak\", \"Naimi\",\nrole = \"ctb\",\ncomment = \"Babak Naimi wrote the function ModisDownload(),\non which some MODIStsp internal functions are based\"))","Description":"Allows automating the creation of time series of rasters\nderived from MODIS satellite land products data. It performs\nseveral typical preprocessing steps such as download,\nmosaicking, reprojecting and resizing data acquired on a\nspecified time period. All processing parameters can be set\nusing a user-friendly GUI. Users can select which layers of the\noriginal MODIS HDF files they want to process, which additional\nquality indicators should be extracted from aggregated MODIS\nquality assurance layers and, in the case of surface\nreflectance products, which spectral indexes should be computed\nfrom the original reflectance bands. For each output layer,\noutputs are saved as single-band raster files corresponding to\neach available acquisition date. Virtual files allowing access\nto the entire time series as a single file are also created.\nCommand-line execution exploiting a previously saved processing\noptions file is also possible, allowing users to automatically\nupdate time series related to a MODIS product whenever a new\nimage is available. For additional documentation refer to the\nfollowing article: Busetto and Ranghetti (2016)\n