Package: chromer 0.8
Karl W Broman
chromer: Interface to Chromosome Counts Database API
A programmatic interface to the Chromosome Counts Database (<https://taux.evolseq.net/CCDB_web/>), Rice et al. (2014) <doi:10.1111/nph.13191>. This package is part of the 'ROpenSci' suite (<https://ropensci.org>).
Authors:
chromer_0.8.tar.gz
chromer_0.8.zip(r-4.5)chromer_0.8.zip(r-4.4)chromer_0.8.zip(r-4.3)
chromer_0.8.tgz(r-4.4-any)chromer_0.8.tgz(r-4.3-any)
chromer_0.8.tar.gz(r-4.5-noble)chromer_0.8.tar.gz(r-4.4-noble)
chromer_0.8.tgz(r-4.4-emscripten)chromer_0.8.tgz(r-4.3-emscripten)
chromer.pdf |chromer.html✨
chromer/json (API)
NEWS
| # Install 'chromer' in R: |
| install.packages('chromer', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ropensci/chromer/issues
Pkgdown site:https://docs.ropensci.org
Last updated 9 months agofrom:86a84541d0 (on master). Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Dec 18 2024 |
| R-4.5-win | OK | Dec 18 2024 |
| R-4.5-linux | OK | Dec 18 2024 |
| R-4.4-win | OK | Dec 18 2024 |
| R-4.4-mac | OK | Dec 18 2024 |
| R-4.3-win | OK | Dec 18 2024 |
| R-4.3-mac | OK | Dec 18 2024 |
Exports:chrom_countssummarize_counts
Dependencies:askpassclicurldplyrfansigenericsgluehttrjsonlitelifecyclemagrittrmimeopensslpillarpkgconfigR6rlangsystibbletidyselectutf8vctrswithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Returns chromosome counts from Chromosome Counts Database API | chrom_counts |
| Summarize chromosome counts from API call | summarize_counts |
