Package: dendroNetwork 0.5.4

Ronald Visser

dendroNetwork: Create Networks of Dendrochronological Series using Pairwise Similarity

Creating dendrochronological networks based on the similarity between tree-ring series or chronologies. The package includes various functions to compare tree-ring curves building upon the 'dplR' package. The networks can be used to visualise and understand the relations between tree-ring curves. These networks are also very useful to estimate the provenance of wood as described in Visser (2021) <doi:10.5334/jcaa.79> or wood-use within a structure/context/site as described in Visser and Vorst (2022) <doi:10.1163/27723194-bja10014>.

Authors:Ronald Visser [aut, cre], Angelino Salentino [ctb], Andy Bunn [ctb], Kaija Gahm [rev], Zachary Gajewski [rev]

dendroNetwork_0.5.4.tar.gz
dendroNetwork_0.5.4.zip(r-4.5)dendroNetwork_0.5.4.zip(r-4.4)dendroNetwork_0.5.4.zip(r-4.3)
dendroNetwork_0.5.4.tgz(r-4.4-any)dendroNetwork_0.5.4.tgz(r-4.3-any)
dendroNetwork_0.5.4.tar.gz(r-4.5-noble)dendroNetwork_0.5.4.tar.gz(r-4.4-noble)
dendroNetwork_0.5.4.tgz(r-4.4-emscripten)dendroNetwork_0.5.4.tgz(r-4.3-emscripten)
dendroNetwork.pdf |dendroNetwork.html
dendroNetwork/json (API)
NEWS

# Install dendroNetwork in R:
install.packages('dendroNetwork', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ropensci/dendronetwork/issues

Datasets:

On CRAN:

archaeologydendrochronologydendroprovenancenetwork-analysistree-rings

13 exports 4 stars 2.01 score 73 dependencies 168 downloads

Last updated 1 months agofrom:4543d3b1b76d75aeca6aaad1338e37a963088453 (via main)

Exports:clique_community_namesclique_community_names_parcor_mat_overlapcyto_clean_stylescyto_create_cpm_stylecyto_create_gn_stylecyto_create_graphdendro_networkfind_all_cpm_comgn_namessim_tablet_valuewuchswerte

Dependencies:askpassbackportsbase64encbase64urlBiocGenericsbitopsbootcaToolsclicodetoolscpp11crayoncurldigestdoParalleldplRdplyrevaluatefansifastmapforeachfsgenericsgluegplotsgraphgtoolshtmltoolshttrigraphIRdisplayIRkerneliteratorsjsonliteKernSmoothlatticelifecyclemagrittrMASSMatrixmatrixStatsmimeopensslpbdZMQpillarpkgconfigplyrpngpurrrR.methodsS3R.ooR.utilsR6RColorBrewerRcppRCurlRCy3reprreshape2RJSONIOrlangsignalstringistringrsystibbletidyrtidyselectutf8uuidvctrswithrXML

Cytoscape visualization

Rendered fromcytoscape.Rmdusingknitr::rmarkdownon Jun 08 2024.

Last update: 2024-04-27
Started: 2024-02-20

dendrochronological data

Rendered fromdendrochronological_data.Rmdusingknitr::rmarkdownon Jun 08 2024.

Last update: 2024-04-05
Started: 2024-04-05

dendroNetwork: how to use it

Rendered fromdendroNetwork.Rmdusingknitr::rmarkdownon Jun 08 2024.

Last update: 2024-04-05
Started: 2024-03-29

Finding communities in large datasets

Rendered fromlarge_datasets_communities.Rmdusingknitr::rmarkdownon Jun 08 2024.

Last update: 2024-04-12
Started: 2024-03-29