Package: helminthR 1.0.10

Tad Dallas

helminthR: Access London Natural History Museum Host-Helminth Record Database

Access to large host-parasite data is often hampered by the availability of data and difficulty in obtaining it in a programmatic way to encourage analyses. 'helminthR' provides a programmatic interface to the London Natural History Museum's host-parasite database, one of the largest host-parasite databases existing currently <https://www.nhm.ac.uk/research-curation/scientific-resources/taxonomy-systematics/host-parasites/>. The package allows the user to query by host species, parasite species, and geographic location.

Authors:Tad Dallas [aut, cre]

helminthR_1.0.10.tar.gz
helminthR_1.0.10.zip(r-4.5)helminthR_1.0.10.zip(r-4.4)helminthR_1.0.10.zip(r-4.3)
helminthR_1.0.10.tgz(r-4.4-any)helminthR_1.0.10.tgz(r-4.3-any)
helminthR_1.0.10.tar.gz(r-4.5-noble)helminthR_1.0.10.tar.gz(r-4.4-noble)
helminthR_1.0.10.tgz(r-4.4-emscripten)helminthR_1.0.10.tgz(r-4.3-emscripten)
helminthR.pdf |helminthR.html
helminthR/json (API)
NEWS

# Install helminthR in R:
install.packages('helminthR', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ropensci/helminthr/issues

Datasets:
  • locations - Table of geographic location names, and associated coordinates

On CRAN:

disease-networkshelminthopen-dataparasites

4 exports 6 stars 1.53 score 123 dependencies 264 downloads

Last updated 2 years agofrom:549957ab0b2a49bc580933d4aa6e1cc75436329f (via master)

Exports:cleanDatafindHostfindLocationfindParasite

Dependencies:apeaskpassassertthatbackportsbase64encbitbit64boldbslibcachemcheckmateclicliprclustercodetoolscolorspacecpp11crayoncrulcurldata.tabledigestdplyrevaluatefansifarverfastmapfastmatchfontawesomeforeachforeignFormulafsgenericsggplot2gluegridExtragtablehighrHmischmshtmlTablehtmltoolshtmlwidgetshttpcodehttrigraphisobanditeratorsjquerylibjsonliteknitrlabelinglatticelazyevallifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnatservnlmennetopensslpbapplyphangornpillarpkgconfigplyrprettyunitsprogresspurrrquadprogR6rappdirsratelimitrRColorBrewerRcppreadrrentrezrexritisrlangrmarkdownrnclrotlrpartrredlistrstudioapirvestsassscalesselectrsolriumstringistringrsystaxizetibbletidyselecttinytextriebeardtzdburltoolsutf8vctrsviridisviridisLitevroomWikidataQueryServiceRWikidataRWikipediRwikitaxawithrworrmsxfunXMLxml2yamlzoo

Introduction to the helminthR package

Rendered fromhelminthR_vignette.Rmdusingknitr::rmarkdownon Jun 15 2024.

Last update: 2022-12-08
Started: 2017-10-08