Package: iheatmapr 0.7.2

Alan OCallaghan

iheatmapr: Interactive, Complex Heatmaps

Make complex, interactive heatmaps. 'iheatmapr' includes a modular system for iteratively building up complex heatmaps, as well as the iheatmap() function for making relatively standard heatmaps.

Authors:Alicia Schep [aut], Sarah Kummerfeld [aut], Genentech [cph], Andee Kaplan [rev], Carl Ganz [rev], Alex Johnson [ctb], Étienne Tétreault-Pinard [ctb], Mikola Lysenko [ctb], Ricky Reusser [ctb], Robert Monfera [ctb], Nicolas Riesco [ctb], Miklós Tusz [ctb], Chelsea Douglas [ctb], Ben Postlethwaite [ctb], Chris Parmer [ctb], Alex Vados [ctb], Plotly [cph], Frederick Boehm [ctb], Alan O'Callaghan [cre]

iheatmapr_0.7.2.tar.gz
iheatmapr_0.7.2.zip(r-4.7)iheatmapr_0.7.2.zip(r-4.6)iheatmapr_0.7.2.zip(r-4.5)
iheatmapr_0.7.2.tgz(r-4.6-any)iheatmapr_0.7.2.tgz(r-4.5-any)
iheatmapr_0.7.2.tar.gz(r-4.7-any)iheatmapr_0.7.2.tar.gz(r-4.6-any)
iheatmapr_0.7.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
iheatmapr/json (API)

# Install 'iheatmapr' in R:

install.packages('iheatmapr', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Reviews:rOpenSci Software Review #107

Bug tracker:https://github.com/ropensci/iheatmapr/issues

Pkgdown/docs site:https://docs.ropensci.org

Datasets:

measles - Measles

On CRAN:

heatmap plotly interactive-visualizations data-visualization htmlwidgets peer-reviewed

9.50 score 270 stars 2 packages 129 scripts 371 downloads 3 mentions 56 exports 43 dependencies

Last updated from:80855f83e0 (on main). Checks:10 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	148
pkgdown docs	OK	192
source / vignettes	OK	215
linux-release-x86_64	OK	149
macos-release-arm64	OK	104
macos-oldrel-arm64	OK	124
windows-devel	OK	156
windows-release	OK	97
windows-oldrel	OK	99
wasm-release	OK	127

Exports:%>%add_annotation add_axis add_col_annotation add_col_barplot add_col_clustering add_col_clusters add_col_dendro add_col_groups add_col_labels add_col_plot add_col_signal add_col_summary add_col_title add_colorbar add_iheatmap add_main_heatmap add_plot add_row_annotation add_row_barplot add_row_clustering add_row_clusters add_row_dendro add_row_groups add_row_labels add_row_plot add_row_signal add_row_summary add_row_title add_shape add_subplot annotations colorbars iheatmap iheatmapr_event iheatmaprOutput main_heatmap make_annotations make_colorbar make_shapes make_trace modify_layout plots renderIheatmap reorder_cols reorder_rows save_iheatmap setup_colorbar_grid setup_tooltip_options shapes test_iheatmapr_event to_plotly_json to_plotly_list to_widget xaxes yaxes

Dependencies:base64enc bslib cachem cli cpp11 digest evaluate farver fastcluster fastmap fontawesome fs ggdendro ggplot2 glue gtable highr htmltools htmlwidgets isoband jquerylib jsonlite knitr labeling lifecycle magrittr MASS memoise mime R6 rappdirs RColorBrewer rlang rmarkdown S7 sass scales tinytex vctrs viridisLite withr xfun yaml

Minimal iheatmpar vignette

Introduction to iheatmapr package | Usage documentation

Rendered fromiheatmapr-minimal.Rmdusingknitr::rmarkdown

Last update: 2024-08-13
Started: 2017-06-04

Help page	Topics
add_col_annotation	add_col_annotation add_col_annotation,Iheatmap-method
add_col_barplot	add_col_barplot add_col_barplot,Iheatmap-method
add_col_clustering	add_col_clustering add_col_clustering,Iheatmap-method
add_col_clusters	add_col_clusters add_col_clusters,Iheatmap-method
add_col_dendro	add_col_dendro add_col_dendro,Iheatmap,hclust-method
add_col_groups	add_col_groups add_col_groups,Iheatmap-method
add_col_labels	add_col_labels add_col_labels,Iheatmap-method
add_col_plot	add_col_plot add_col_plot,Iheatmap-method
add_col_signal	add_col_signal add_col_signal,Iheatmap-method
add_col_summary	add_col_summary add_col_summary,Iheatmap-method
add_col_title	add_col_title add_col_title,Iheatmap-method
add_iheatmap	add_iheatmap add_iheatmap,IheatmapHorizontal,matrix-method add_iheatmap,IheatmapVertical,matrix-method
add_main_heatmap	add_main_heatmap add_main_heatmap,IheatmapHorizontal,matrix-method add_main_heatmap,IheatmapVertical,matrix-method
add_row_annotation	add_row_annotation add_row_annotation,Iheatmap-method
add_row_barplot	add_row_barplot add_row_barplot,Iheatmap-method
add_row_clustering	add_row_clustering add_row_clustering,Iheatmap-method
add_row_clusters	add_row_clusters add_row_clusters,Iheatmap-method
add_row_dendro	add_row_dendro add_row_dendro,Iheatmap,hclust-method
add_row_groups	add_row_groups add_row_groups,Iheatmap-method
add_row_labels	add_row_labels add_row_labels,Iheatmap-method
add_row_plot	add_row_plot add_row_plot,Iheatmap-method
add_row_signal	add_row_signal add_row_signal,Iheatmap-method
add_row_summary	add_row_summary add_row_summary,Iheatmap-method
add_row_title	add_row_title add_row_title,Iheatmap-method
add_subplot	add_subplot add_subplot,Iheatmap-method
iheatmap	iheatmap iheatmap,matrix-method
Iheatmap-class	Iheatmap-class IheatmapHorizontal IheatmapHorizontal-class IheatmapVertical IheatmapVertical-class
iheatmapr	iheatmapr
Access iheatmapr user input event data in shiny	iheatmapr_event
Shiny bindings for iheatmapr	iheatmapr-shiny iheatmaprOutput renderIheatmap
main_heatmap	main_heatmap main_heatmap,matrix-method
measles	measles
modify_layout	modify_layout modify_layout,Iheatmap-method
reorder_cols	reorder_cols reorder_cols,IheatmapHorizontal,integer-method reorder_cols,IheatmapVertical,integer-method
reorder_rows	reorder_rows reorder_rows,IheatmapHorizontal,integer-method reorder_rows,IheatmapVertical,integer-method
save_iheatmap	save_iheatmap save_iheatmap,Iheatmap,character-method
setup_colorbar_grid	setup_colorbar_grid
Tooltip Options	setup_tooltip_options
test_iheatmapr_event	test_iheatmapr_event
Convert Iheatmap to plotly spec	to_plotly to_plotly_json to_plotly_list
to_widget	to_widget to_widget,Iheatmap-method

Package: iheatmapr 0.7.2

iheatmapr: Interactive, Complex Heatmaps

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Help Manual

Usage by other packages (reverse dependencies)