Package: iheatmapr 0.7.0

Alan OCallaghan

iheatmapr: Interactive, Complex Heatmaps

Make complex, interactive heatmaps. 'iheatmapr' includes a modular system for iteratively building up complex heatmaps, as well as the iheatmap() function for making relatively standard heatmaps.

Authors:Alicia Schep [aut], Sarah Kummerfeld [aut], Genentech [cph], Andee Kaplan [rev], Carl Ganz [rev], Alex Johnson [ctb], Étienne Tétreault-Pinard [ctb], Mikola Lysenko [ctb], Ricky Reusser [ctb], Robert Monfera [ctb], Nicolas Riesco [ctb], Miklós Tusz [ctb], Chelsea Douglas [ctb], Ben Postlethwaite [ctb], Chris Parmer [ctb], Alex Vados [ctb], Plotly [cph], Frederick Boehm [ctb], Alan O'Callaghan [cre]

iheatmapr_0.7.0.tar.gz
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iheatmapr_0.7.0.tgz(r-4.4-any)iheatmapr_0.7.0.tgz(r-4.3-any)
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iheatmapr.pdf |iheatmapr.html
iheatmapr/json (API)
NEWS

# Install iheatmapr in R:
install.packages('iheatmapr', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ropensci/iheatmapr/issues

Datasets:

On CRAN:

heatmapplotlyinteractive-visualizationsdata-visualizationhtmlwidgetspeer-reviewed

56 exports 267 stars 6.05 score 52 dependencies 1 dependents 581 downloads

Last updated 11 months agofrom:2fc34790d5af20e9fe99e7752c958ef8f470e2ad (via main)

Exports:%>%add_annotationadd_axisadd_col_annotationadd_col_barplotadd_col_clusteringadd_col_clustersadd_col_dendroadd_col_groupsadd_col_labelsadd_col_plotadd_col_signaladd_col_summaryadd_col_titleadd_colorbaradd_iheatmapadd_main_heatmapadd_plotadd_row_annotationadd_row_barplotadd_row_clusteringadd_row_clustersadd_row_dendroadd_row_groupsadd_row_labelsadd_row_plotadd_row_signaladd_row_summaryadd_row_titleadd_shapeadd_subplotannotationscolorbarsiheatmapiheatmapr_eventiheatmaprOutputmain_heatmapmake_annotationsmake_colorbarmake_shapesmake_tracemodify_layoutplotsrenderIheatmapreorder_colsreorder_rowssave_iheatmapsetup_colorbar_gridsetup_tooltip_optionsshapestest_iheatmapr_eventto_plotly_jsonto_plotly_listto_widgetxaxesyaxes

Dependencies:base64encbslibcachemclicolorspacedigestevaluatefansifarverfastclusterfastmapfontawesomefsggdendroggplot2gluegtablehighrhtmltoolshtmlwidgetsisobandjquerylibjsonliteknitrlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmepillarpkgconfigR6rappdirsRColorBrewerrlangrmarkdownsassscalestibbletinytexutf8vctrsviridisLitewithrxfunyaml

Minimal iheatmpar vignette

Rendered fromiheatmapr-minimal.Rmdusingknitr::rmarkdownon Jun 08 2024.

Last update: 2020-10-14
Started: 2017-06-04

Readme and manuals

Help Manual

Help pageTopics
add_col_annotationadd_col_annotation add_col_annotation,Iheatmap-method
add_col_barplotadd_col_barplot add_col_barplot,Iheatmap-method
add_col_clusteringadd_col_clustering add_col_clustering,Iheatmap-method
add_col_clustersadd_col_clusters add_col_clusters,Iheatmap-method
add_col_dendroadd_col_dendro add_col_dendro,Iheatmap,hclust-method
add_col_groupsadd_col_groups add_col_groups,Iheatmap-method
add_col_labelsadd_col_labels add_col_labels,Iheatmap-method
add_col_plotadd_col_plot add_col_plot,Iheatmap-method
add_col_signaladd_col_signal add_col_signal,Iheatmap-method
add_col_summaryadd_col_summary add_col_summary,Iheatmap-method
add_col_titleadd_col_title add_col_title,Iheatmap-method
add_iheatmapadd_iheatmap add_iheatmap,IheatmapHorizontal,matrix-method add_iheatmap,IheatmapVertical,matrix-method
add_main_heatmapadd_main_heatmap add_main_heatmap,IheatmapHorizontal,matrix-method add_main_heatmap,IheatmapVertical,matrix-method
add_row_annotationadd_row_annotation add_row_annotation,Iheatmap-method
add_row_barplotadd_row_barplot add_row_barplot,Iheatmap-method
add_row_clusteringadd_row_clustering add_row_clustering,Iheatmap-method
add_row_clustersadd_row_clusters add_row_clusters,Iheatmap-method
add_row_dendroadd_row_dendro add_row_dendro,Iheatmap,hclust-method
add_row_groupsadd_row_groups add_row_groups,Iheatmap-method
add_row_labelsadd_row_labels add_row_labels,Iheatmap-method
add_row_plotadd_row_plot add_row_plot,Iheatmap-method
add_row_signaladd_row_signal add_row_signal,Iheatmap-method
add_row_summaryadd_row_summary add_row_summary,Iheatmap-method
add_row_titleadd_row_title add_row_title,Iheatmap-method
add_subplotadd_subplot add_subplot,Iheatmap-method
iheatmapiheatmap iheatmap,matrix-method
Iheatmap-classIheatmap-class IheatmapHorizontal IheatmapHorizontal-class IheatmapVertical IheatmapVertical-class
iheatmapriheatmapr
Access iheatmapr user input event data in shinyiheatmapr_event
Shiny bindings for iheatmapriheatmapr-shiny iheatmaprOutput renderIheatmap
main_heatmapmain_heatmap main_heatmap,matrix-method
measlesmeasles
modify_layoutmodify_layout modify_layout,Iheatmap-method
reorder_colsreorder_cols reorder_cols,IheatmapHorizontal,integer-method reorder_cols,IheatmapVertical,integer-method
reorder_rowsreorder_rows reorder_rows,IheatmapHorizontal,integer-method reorder_rows,IheatmapVertical,integer-method
save_iheatmapsave_iheatmap save_iheatmap,Iheatmap,character-method
setup_colorbar_gridsetup_colorbar_grid
Tooltip Optionssetup_tooltip_options
test_iheatmapr_eventtest_iheatmapr_event
Convert Iheatmap to plotly specto_plotly to_plotly_json to_plotly_list
to_widgetto_widget to_widget,Iheatmap-method