Package: ijtiff 3.2.0

Rory Nolan

ijtiff: Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files

General purpose TIFF file I/O for R users. Currently the only such package with read and write support for TIFF files with floating point (real-numbered) pixels, and the only package that can correctly import TIFF files that were saved from 'ImageJ' and write TIFF files than can be correctly read by 'ImageJ' <https://imagej.net/ij/>. Also supports text image I/O.

Authors:Rory Nolan [aut, cre], Kent Johnson [aut], Simon Urbanek [ctb], Sergi Padilla-Parra [ths], Jeroen Ooms [rev, ctb], Jon Clayden [rev]

ijtiff_3.2.0.tar.gz
ijtiff_3.2.0.zip(r-4.7)ijtiff_3.2.0.zip(r-4.6)ijtiff_3.2.0.zip(r-4.5)
ijtiff_3.2.0.tgz(r-4.6-x86_64)ijtiff_3.2.0.tgz(r-4.6-arm64)ijtiff_3.2.0.tgz(r-4.5-x86_64)ijtiff_3.2.0.tgz(r-4.5-arm64)
ijtiff_3.2.0.tar.gz(r-4.7-arm64)ijtiff_3.2.0.tar.gz(r-4.7-x86_64)ijtiff_3.2.0.tar.gz(r-4.6-arm64)ijtiff_3.2.0.tar.gz(r-4.6-x86_64)
ijtiff_3.2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ijtiff/json (API)

# Install 'ijtiff' in R:
install.packages('ijtiff', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Reviews:rOpenSci Software Review #164

Bug tracker:https://github.com/ropensci/ijtiff/issues

Pkgdown/docs site:https://docs.ropensci.org

Uses libs:
  • tiff– Tag Image File Format (TIFF) library

On CRAN:

Conda:

image-manipulationimagejpeer-reviewedtiff-filestiff-imagestiff

8.48 score 17 stars 8 packages 55 scripts 1.1k downloads 1 mentions 21 exports 36 dependencies

Last updated from:4b8eb63143 (on master). Checks:14 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK175
linux-devel-x86_64OK151
pkgdown docsOK175
source / vignettesOK213
linux-release-arm64OK165
linux-release-x86_64OK160
macos-release-arm64OK130
macos-release-x86_64OK227
macos-oldrel-arm64OK109
macos-oldrel-x86_64OK301
windows-develOK116
windows-releaseOK115
windows-oldrelOK119
wasm-releaseOK165

Exports:as_EBImageas_ijtiff_imgas.rastercount_framesdisplayframes_countget_supported_tagsijtiff_imglinescan_to_stackread_tagsread_tifread_txt_imgstack_to_linescantags_readtif_readtif_tags_referencetif_writetxt_img_readtxt_img_writewrite_tifwrite_txt_img

Dependencies:backportsbitbit64checkmateclicliprcpp11crayondplyrfsgenericsgluehmsjsonlitelifecyclelubridatemagrittrpillarpkgconfigprettyunitsprogresspurrrR6readrrlangstrexstringistringrtibbletidyselecttimechangetzdbutf8vctrsvroomwithr

The ImageJ Problem
Introduction | Frames and Channels in TIFF files | The Peculiarity of ImageJ TIFF files | Reading ImageJ TIFF files | The original tiff package | The ijtiff package | Note | Advice for all ImageJ users
Rendered fromthe-imagej-problem.Rmdusingknitr::rmarkdown

Last update: 2025-03-07
Started: 2018-09-05

Working with TIFF Tags
Introduction to TIFF Tags | Supported TIFF Tags | Reading Tags from TIFF Files | Understanding Tag Values | Tags in Multi-Frame TIFF Files | Conclusion
Rendered fromtiff-tags.Rmdusingknitr::rmarkdown

Last update: 2025-03-07
Started: 2025-03-04

Reading and Writing Images
Reading TIFF files | Reading only certain frames | More examples | Writing TIFF files | Reading text images | Writing text images
Rendered fromreading-and-writing-images.Rmdusingknitr::rmarkdown

Last update: 2025-03-07
Started: 2018-09-05

Text Images
What are text images | What are they good for? | You might need to read them | You might (once in a million years) want to write them
Rendered fromtext-images.Rmdusingknitr::rmarkdown

Last update: 2018-09-05
Started: 2018-09-05