Package: rglobi 0.3.4

Jorrit Poelen

rglobi: Interface to Global Biotic Interactions

A programmatic interface to the web service methods provided by Global Biotic Interactions (GloBI) (<https://www.globalbioticinteractions.org/>). GloBI provides access to spatial-temporal species interaction records from sources all over the world. rglobi provides methods to search species interactions by location, interaction type, and taxonomic name.

Authors:Jorrit Poelen [aut, cre], Stephen Gosnell [aut], Sergey Slyusarev [aut], Helen Waters [aut]

rglobi_0.3.4.tar.gz
rglobi_0.3.4.zip(r-4.7)rglobi_0.3.4.zip(r-4.6)rglobi_0.3.4.zip(r-4.5)
rglobi_0.3.4.tgz(r-4.6-any)rglobi_0.3.4.tgz(r-4.5-any)
rglobi_0.3.4.tar.gz(r-4.7-any)rglobi_0.3.4.tar.gz(r-4.6-any)
rglobi_0.3.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
rglobi/json (API)

# Install 'rglobi' in R:

install.packages('rglobi', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ropensci/rglobi/issues

Pkgdown/docs site:https://docs.ropensci.org

On CRAN:

7.31 score 18 stars 1 packages 47 scripts 338 downloads 2 mentions 10 exports 27 dependencies

Last updated from:6506c2a210 (on main). Checks:10 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	133
pkgdown docs	OK	332
source / vignettes	OK	173
linux-release-x86_64	OK	131
macos-release-arm64	OK	85
macos-oldrel-arm64	OK	107
windows-devel	OK	72
windows-release	OK	80
windows-oldrel	OK	69
wasm-release	OK	110

Exports:get_data_fields get_interaction_areas get_interaction_matrix get_interaction_types get_interactions get_interactions_by_taxa get_interactions_by_type get_interactions_in_area get_predators_of get_prey_of

Dependencies:bit bit64 bitops cli clipr cpp11 crayon curl glue hms lifecycle magrittr pillar pkgconfig prettyunits progress R6 RCurl readr rlang tibble tidyselect tzdb utf8 vctrs vroom withr

Introduction to the rglobi package

rglobi vignette - an R interface to the aggregated biotic interaction data of GloBI (https://www.globalbioticinteractions.org) | About the package | Quick start | First, install rglobi | Find interactions involving a certain species | Find interactions in a geographic areas

Rendered fromrglobi_vignette.Rmdusingknitr::knitr

Last update: 2023-10-05
Started: 2015-03-25

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
List data fields identified in GloBI database	get_data_fields
Find locations at which interactions were observed	get_interaction_areas
Get Interaction Matrix. Constructs an interaction matrix indicating whether source taxa (rows) or target taxa (columns) are known to interact with given type.	get_interaction_matrix
List interactions identified in GloBI database	get_interaction_types
Get Species Interaction from GloBI	get_interactions
Return interactions involving specific taxa	get_interactions_by_taxa
Get Species Interactions by Interaction Type from GloBI	get_interactions_by_type
Return all interactions in specified area	get_interactions_in_area
Get a List of Predators of a Given Prey Taxon	get_predators_of
Get a List of Prey for given Predator Taxon	get_prey_of