Package: worrms 0.4.3

Bart Vanhoorne.

worrms: World Register of Marine Species (WoRMS) Client

Client for World Register of Marine Species (<https://www.marinespecies.org/>). Includes functions for each of the API methods, including searching for names by name, date and common names, searching using external identifiers, fetching synonyms, as well as fetching taxonomic children and taxonomic classification.

Authors:Scott Chamberlain [aut], Bart Vanhoorne. [aut, cre]

worrms_0.4.3.tar.gz
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worrms.pdf |worrms.html✨
worrms/json (API)
NEWS

# Install 'worrms' in R:
install.packages('worrms', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ropensci/worrms/issues

On CRAN:

biologysciencemarineapiwebapi-clientwormsspeciesapi-wrapperbiological-datafishjerico-relevantmarine-biologymarine-speciestaxizetaxonomy

39 exports 23 stars 4.53 score 21 dependencies 31 dependents 1 mentions 3.4k downloads

Last updated 6 months agofrom:c5fe3938cf (on master)

Exports:wm_attr_aphiawm_attr_aphia_wm_attr_categorywm_attr_category_wm_attr_datawm_attr_data_wm_attr_defwm_attr_def_wm_childrenwm_children_wm_classificationwm_classification_wm_common_idwm_common_id_wm_distributionwm_distribution_wm_externalwm_external_wm_id2namewm_id2name_wm_name2idwm_name2id_wm_ranks_idwm_ranks_namewm_recordwm_record_wm_record_by_externalwm_record_by_external_wm_records_commonwm_records_common_wm_records_datewm_records_namewm_records_nameswm_records_rankwm_records_taxamatchwm_sourceswm_sources_wm_synonymswm_synonyms_

Dependencies:clicrulcurldata.tablefansigluehttpcodejsonlitelifecyclemagrittrmimepillarpkgconfigR6Rcpprlangtibbletriebeardurltoolsutf8vctrs

Introduction to worrms

Scott Chamberlain

Rendered fromworrms.Rmdusingknitr::rmarkdownon Jul 12 2024.

Last update: 2023-06-19
Started: 2019-06-14

Readme and manuals

Help Manual

Help pageTopics
worrmsworrms-package worrms
Get AphiaIDs by attribute definition IDwm_attr_aphia wm_attr_aphia_
Get attributes grouped by a CategoryIDwm_attr_category wm_attr_category_
Get attribute data by AphiaIDwm_attr_data wm_attr_data_
Get attribute definition by IDwm_attr_def wm_attr_def_
Get children for an AphiaIDwm_children wm_children_
Get classification for an AphiaIDwm_classification wm_classification_
Get vernacular names from an AphiaIDwm_common_id wm_common_id_
Get distribution data by AphiaIDwm_distribution wm_distribution_
Get an external ID via an AphiaIDwm_external wm_external_
Get taxonomic name for an AphiaIDwm_id2name wm_id2name_
Get AphiaID from a taxonomic namewm_name2id wm_name2id_
Get taxonomic ranks by their identifierwm_ranks wm_ranks_id wm_ranks_name
Get complete AphiaRecord for an AphiaIDwm_record wm_record_
Get record by external IDwm_record_by_external wm_record_by_external_
Get records by vernacular name, optional fuzzy matchingwm_records_common wm_records_common_
Get records by datewm_records_date
Get records by single name, optional fuzzy matchingwm_records_name
Get records for one or more taxonomic name(s)wm_records_names
Get AphiaRecords for a given taxonRankIDwm_records_rank
Get records for one or more taxonomic name(s) using the TAXAMATCH fuzzy matching algorithmwm_records_taxamatch
Get sources for an AphiaIDwm_sources wm_sources_
Get synonyms for an AphiaIDwm_synonyms wm_synonyms_