Package: allodb 0.0.1.9000
Erika Gonzalez-Akre
allodb: Tree Biomass Estimation at Extra-Tropical Forest Plots
Standardize and simplify the tree biomass estimation process across globally distributed extratropical forests.
Authors:
allodb_0.0.1.9000.tar.gz
allodb_0.0.1.9000.zip(r-4.5)allodb_0.0.1.9000.zip(r-4.4)allodb_0.0.1.9000.zip(r-4.3)
allodb_0.0.1.9000.tgz(r-4.4-any)allodb_0.0.1.9000.tgz(r-4.3-any)
allodb_0.0.1.9000.tar.gz(r-4.5-noble)allodb_0.0.1.9000.tar.gz(r-4.4-noble)
allodb_0.0.1.9000.tgz(r-4.4-emscripten)allodb_0.0.1.9000.tgz(r-4.3-emscripten)
allodb.pdf |allodb.html✨
allodb/json (API)
| # Install 'allodb' in R: |
| install.packages('allodb', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ropensci/allodb/issues
Pkgdown:https://docs.ropensci.org
- equations - Tables of allometric equations and associated metadata
- equations_metadata - Tables of allometric equations and associated metadata
- genus_family - Genus and family table for selected ForestGEO sites
- gymno_genus - Gymnosperms identified in selected ForestGEO sites
- koppenMatrix - Koppen climate classification matrix
- missing_values - Explanations of missing values codes
- references - Equation references and associated metadata
- references_metadata - Equation references and associated metadata
- scbi_stem1 - Tree census data from SCBI ForestGEO plot
- shrub_species - Shrub species identified in selected ForestGEO sites
- sites_info - ForestGEO sites used in allodb
- sitespecies - Sites and tree species used in allodb and associated metadata
- sitespecies_metadata - Sites and tree species used in allodb and associated metadata
Last updated 3 years agofrom:4207f86164 (on master). Checks:OK: 3 NOTE: 4. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Dec 16 2024 |
| R-4.5-win | OK | Dec 16 2024 |
| R-4.5-linux | OK | Dec 16 2024 |
| R-4.4-win | NOTE | Dec 16 2024 |
| R-4.4-mac | NOTE | Dec 16 2024 |
| R-4.3-win | NOTE | Dec 16 2024 |
| R-4.3-mac | NOTE | Dec 16 2024 |
Exports:est_paramsget_biomassillustrate_allodbnew_equationsresample_agbweight_allom
Dependencies:clicolorspacedata.tablefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Tables of allometric equations and associated metadata | equations equations_metadata |
| Calibrate new allometric equations | est_params |
| Genus and family table for selected ForestGEO sites | genus_family |
| Compute tree aboveground biomass (AGB) based on allometric equations | get_biomass |
| Gymnosperms identified in selected ForestGEO sites | gymno_genus |
| Illustrate the resampling of AGB values used in _allodb_ | illustrate_allodb |
| Koppen climate classification matrix | koppenMatrix |
| Explanations of missing values codes | missing_values |
| Modify the original equation table | new_equations |
| Equation references and associated metadata | references references_metadata |
| Resample _allodb_ equations to calibrate new allometries | resample_agb |
| Tree census data from SCBI ForestGEO plot | scbi_stem1 |
| Shrub species identified in selected ForestGEO sites | shrub_species |
| ForestGEO sites used in allodb | sites_info |
| Sites and tree species used in allodb and associated metadata | sitespecies sitespecies_metadata |
| Attribute weights to equations | weight_allom |
