Package: jagstargets 1.2.3

William Michael Landau

jagstargets: Targets for JAGS Pipelines

Bayesian data analysis usually incurs long runtimes and cumbersome custom code. A pipeline toolkit tailored to Bayesian statisticians, the 'jagstargets' R package is leverages 'targets' and 'R2jags' to ease this burden. 'jagstargets' makes it super easy to set up scalable JAGS pipelines that automatically parallelize the computation and skip expensive steps when the results are already up to date. Minimal custom code is required, and there is no need to manually configure branching, so usage is much easier than 'targets' alone. For the underlying methodology, please refer to the documentation of 'targets' <doi:10.21105/joss.02959> and 'JAGS' (Plummer 2003) <https://www.r-project.org/conferences/DSC-2003/Proceedings/Plummer.pdf>.

Authors:William Michael Landau [aut, cre], David Lawrence Miller [rev], Eli Lilly and Company [cph]

jagstargets_1.2.3.tar.gz
jagstargets_1.2.3.zip(r-4.7)jagstargets_1.2.3.zip(r-4.6)jagstargets_1.2.3.zip(r-4.5)
jagstargets_1.2.3.tgz(r-4.6-any)jagstargets_1.2.3.tgz(r-4.5-any)
jagstargets_1.2.3.tar.gz(r-4.7-any)jagstargets_1.2.3.tar.gz(r-4.6-any)
jagstargets_1.2.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
jagstargets/json (API)

# Install 'jagstargets' in R:
install.packages('jagstargets', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Reviews:rOpenSci Software Review #425

Bug tracker:https://github.com/ropensci/jagstargets/issues

Pkgdown/docs site:https://docs.ropensci.org

Uses libs:
  • jags– Just Another Gibbs Sampler for Bayesian MCMC
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

bayesianhigh-performance-computingjagsmaker-targetopiareproducibilityrjagsstatisticstargetscpp

6.25 score 11 stars 40 scripts 656 downloads 10 exports 58 dependencies

Last updated from:fef92d0d74 (on main). Checks:10 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK202
pkgdown docsOK242
source / vignettesOK191
linux-release-x86_64OK187
macos-release-arm64OK105
macos-oldrel-arm64OK117
windows-develOK113
windows-releaseOK154
windows-oldrelOK117
wasm-releaseOK125

Exports:tar_jagstar_jags_dftar_jags_example_datatar_jags_example_filetar_jags_rep_data_batchtar_jags_rep_dictar_jags_rep_drawstar_jags_rep_runtar_jags_rep_summarytar_jags_run

Dependencies:abindbackportsbase64urlbootcallrcheckmateclicodacodetoolscpp11data.tabledistributionaldplyrevaluatefsfstfstcoregenericsgluehighrigraphknitrlatticelifecyclemagrittrMatrixmatrixStatsnumDerivotelpillarpkgconfigposteriorprettyunitsprocessxpspurrrqs2R2jagsR2WinBUGSR6RcppRcppParallelrjagsrlangsecretbasestringfishstringistringrtarchetypestargetstensorAtibbletidyselectutf8vctrswithrxfunyaml

Bayesian simulation pipelines with jagstargets
Multiple models | References

Last update: 2022-06-24
Started: 2021-05-08

Introduction to jagstargets
Multiple models | More information

Last update: 2022-06-21
Started: 2021-05-08