Package: mauricer 2.5.5

Richèl J.C. Bilderbeek

mauricer: Work with 'BEAST2' Packages

'BEAST2' (<https://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'BEAST2' is commonly accompanied by 'BEAUti 2' (<https://www.beast2.org>), which, among others, allows one to install 'BEAST2' package. This package allows to work with 'BEAST2' packages from 'R'.

Authors:Richèl J.C. Bilderbeek [aut, cre], Olivier Roy [ctb]

mauricer_2.5.5.tar.gz
mauricer_2.5.5.zip(r-4.7)mauricer_2.5.5.zip(r-4.6)mauricer_2.5.5.zip(r-4.5)
mauricer_2.5.5.tgz(r-4.6-any)mauricer_2.5.5.tgz(r-4.5-any)
mauricer_2.5.5.tar.gz(r-4.7-any)mauricer_2.5.5.tar.gz(r-4.6-any)
mauricer_2.5.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
mauricer/json (API)

# Install 'mauricer' in R:

install.packages('mauricer', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ropensci/mauricer/issues

Pkgdown/docs site:https://docs.ropensci.org

Uses libs:

openjdk– OpenJDK Java runtime, using Hotspot JIT

On CRAN:

openjdk

5.55 score 3 stars 2 packages 13 scripts 645 downloads 7 exports 51 dependencies

Last updated from:e6dffca22b (on main). Checks:10 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	145
pkgdown docs	OK	179
source / vignettes	OK	185
linux-release-x86_64	OK	137
macos-release-arm64	OK	73
macos-oldrel-arm64	OK	83
windows-devel	OK	76
windows-release	OK	85
windows-oldrel	OK	74
wasm-release	OK	166

Exports:get_beast2_pkg_names get_mrc_path get_mrc_paths install_beast2_pkg is_beast2_ns_pkg_installed is_beast2_pkg_installed uninstall_beast2_pkg

Dependencies:ade4 ape beastier beautier bit bit64 cli clipr cpp11 crayon digest fastmatch generics glue hms igraph lattice lifecycle magrittr MASS Matrix nlme phangorn pillar pixmap pkgconfig prettyunits progress purrr quadprog R6 rappdirs Rcpp RcppArmadillo readr rJava rlang segmented seqinr sessioninfo sp stringi stringr tibble tidyselect tzdb utf8 vctrs vroom withr xml2

mauricer demo

Introduction | List all BEAST2 packages | Install the first non-installed BEAST2 package | Uninstall the BEAST2 package

Rendered fromdemo.Rmdusingknitr::rmarkdown

Last update: 2021-05-22
Started: 2018-09-11

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
This function does nothing. It is intended to inherit is parameters' documentation.	default_params_doc
Get all BEAST2 package names	get_beast2_pkg_names
Get the full path of a 'mauricer' file	get_mrc_path
Get the full path of one or more 'mauricer' files	get_mrc_paths
Install a BEAST2 package	install_beast2_pkg
Is the BEAST2 NS package installed?	is_beast2_ns_pkg_installed
Is a BEAST2 package installed?	is_beast2_pkg_installed
Uninstall a BEAST2 package	uninstall_beast2_pkg