Package: mauricer 2.5.4

Richèl J.C. Bilderbeek

mauricer: Work with 'BEAST2' Packages

'BEAST2' (<https://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'BEAST2' is commonly accompanied by 'BEAUti 2' (<https://www.beast2.org>), which, among others, allows one to install 'BEAST2' package. This package allows to work with 'BEAST2' packages from 'R'.

Authors:Richèl J.C. Bilderbeek [aut, cre], Olivier Roy [ctb]

mauricer_2.5.4.tar.gz
mauricer_2.5.4.zip(r-4.5)mauricer_2.5.4.zip(r-4.4)mauricer_2.5.4.zip(r-4.3)
mauricer_2.5.4.tgz(r-4.4-any)mauricer_2.5.4.tgz(r-4.3-any)
mauricer_2.5.4.tar.gz(r-4.5-noble)mauricer_2.5.4.tar.gz(r-4.4-noble)
mauricer_2.5.4.tgz(r-4.4-emscripten)mauricer_2.5.4.tgz(r-4.3-emscripten)
mauricer.pdf |mauricer.html✨
mauricer/json (API)
NEWS

# Install 'mauricer' in R:

install.packages('mauricer', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ropensci/mauricer/issues

Uses libs:

openjdk– OpenJDK Java runtime, using Hotspot JIT

On CRAN:

7 exports 3 stars 2.12 score 52 dependencies 2 dependents 623 downloads

Last updated 2 months agofrom:6c8ff186c5 (on master)

Exports:get_beast2_pkg_names get_mrc_path get_mrc_paths install_beast2_pkg is_beast2_ns_pkg_installed is_beast2_pkg_installed uninstall_beast2_pkg

Dependencies:ade4 ape beastier beautier bit bit64 cli clipr cpp11 crayon digest fansi fastmatch generics glue hms igraph lattice lifecycle magrittr MASS Matrix nlme phangorn pillar pixmap pkgconfig prettyunits progress purrr quadprog R6 rappdirs Rcpp RcppArmadillo readr rJava rlang segmented seqinr sessioninfo sp stringi stringr tibble tidyselect tzdb utf8 vctrs vroom withr xml2

mauricer demo

Richèl J.C. Bilderbeek

Rendered fromdemo.Rmdusingknitr::rmarkdownon Jul 10 2024.

Last update: 2021-05-22
Started: 2018-09-11

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
This function does nothing. It is intended to inherit is parameters' documentation.	default_params_doc
Get all BEAST2 package names	get_beast2_pkg_names
Get the full path of a 'mauricer' file	get_mrc_path
Get the full path of one or more 'mauricer' files	get_mrc_paths
Install a BEAST2 package	install_beast2_pkg
Is the BEAST2 NS package installed?	is_beast2_ns_pkg_installed
Is a BEAST2 package installed?	is_beast2_pkg_installed
Uninstall a BEAST2 package	uninstall_beast2_pkg