Package: treebase 0.1.5

Carl Boettiger

treebase: Discovery, Access and Manipulation of 'TreeBASE' Phylogenies

Interface to the API for 'TreeBASE' <http://treebase.org> from 'R.' 'TreeBASE' is a repository of user-submitted phylogenetic trees (of species, population, or genes) and the data used to create them.

Authors:Carl Boettiger [aut, cre], Duncan Temple Lang [aut]

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treebase.pdf |treebase.html
treebase/json (API)
NEWS

# Install treebase in R:
install.packages('treebase', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ropensci/treebase/issues

Datasets:

On CRAN:

7 exports 10 stars 1.97 score 16 dependencies 2 dependents 345 downloads

Last updated 4 months agofrom:5954c072bb9b2168a3d6554316a5d7f28d087584 (via master)

Exports:cache_treebasedownload_metadatadrop_nontreesdryad_metadatahave_branchlengthmetadatasearch_treebase

Dependencies:apeaskpassbitopscurldigesthttrjsonlitelatticemimenlmeopensslR6RcppRCurlsysXML

Treebase Tutorial

Rendered fromvignette.Rmdusingknitr::rmarkdownon Jun 12 2024.

Last update: 2024-02-16
Started: 2014-02-20