Package: treebase 0.1.5

Carl Boettiger

treebase: Discovery, Access and Manipulation of 'TreeBASE' Phylogenies

Interface to the API for 'TreeBASE' <http://treebase.org> from 'R.' 'TreeBASE' is a repository of user-submitted phylogenetic trees (of species, population, or genes) and the data used to create them.

Authors:Carl Boettiger [aut, cre], Duncan Temple Lang [aut]

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treebase.pdf |treebase.html✨
treebase/json (API)
NEWS

# Install 'treebase' in R:
install.packages('treebase', repos = c('https://ropensci.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ropensci/treebase/issues

Datasets:

On CRAN:

7 exports 10 stars 2.36 score 16 dependencies 2 dependents 3 mentions 353 downloads

Last updated 5 months agofrom:5954c072bb (on master)

Exports:cache_treebasedownload_metadatadrop_nontreesdryad_metadatahave_branchlengthmetadatasearch_treebase

Dependencies:apeaskpassbitopscurldigesthttrjsonlitelatticemimenlmeopensslR6RcppRCurlsysXML

Treebase Tutorial

Carl Boettiger

Rendered fromvignette.Rmdusingknitr::rmarkdownon Jul 12 2024.

Last update: 2024-02-16
Started: 2014-02-20